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Am J Physiol Endocrinol Metab (December 4, 2001). doi:10.1152/ajpendo.00511.2001
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Articles in PresS, published online ahead of print December 4, 2001
Am J Physiol Endocrinol Metab, 10.1152/ajpendo.00511.2001
Submitted on November 12, 2001
Accepted on November 29, 2001

Control of ubiquitination of proteins in rat tissues by ubiquitin conjugating enzymes and isopeptidases

Venkatesh Rajapurohitam1, Nathalie Bedard1, and Simon S Wing1*

1 Medicine, Polypeptide Laboratory, McGill University, Montreal, Quebec, Canada

* To whom correspondence should be addressed. E-mail: simon.wing{at}mcgill.ca.

The activity of the ubiquitin-dependent proteolytic system in differentiated tissues under basal conditions remains poorly explored. We measured rates of ubiquitination in rat tissue extracts. Accumulation of ubiquitinated proteins increased in the presence of ubiquitin aldehyde, indicating that deubiquitinating enzymes can regulate ubiquitination. Rates of ubiquitination varied four fold, the highest rate in the testis. We tested whether ubiquitin activating enzyme (E1) or ubiquitin conjugating enzymes (E2s) could be limiting for conjugation. Immunodepletion of UBC2 or UBC4 lowered rates of conjugation similarly. Supplementation of extracts with excess UBC2 or UBC4, but not E1, stimulated conjugation. However, UBC2 stimulated rates of ubiquitination still differed amongst tissues indicating that tissue differences in E3s or substrate availability may also be rate controlling. UBC2 and UBC4 stimulated conjugation half-maximally at concentrations of 10-50 nM and 28-44 nM respectively. Endogenous tissue levels of UBC2, but not UBC4 appeared saturating for conjugation suggesting that in vivo modulation of UBC4 levels can likely control ubiquitin conjugation. Thus, the pool of ubiquitin conjugates and therefore the rate of degradation of proteins by this system may be controlled by E2s, E3s, and isopeptidases. The regulation of the ubiquitin pathway appears complex, but precise.




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